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Transcription
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Ampka1--

  *** Ikba-gene mRNA[RTPCR] is increased irt Lps (3 hr)
    *** cells: THP1 in BMS
    *** reqs: Ampka1 [RNAi]
    *** source: 22833096-Fig-4d

Ikk2--

  *** Ikba-gene mRNA[Northern] is increased irt Lps (times)
    *** cells: mEFs in BMS
    *** times: 0 1++ 5+ hr
    *** partially reqs: Ikk2 [KO]
    *** source: 12736252-Fig-1a,2a
  *** Ikba-gene mRNA[Northern] is increased irt Lps (times)
    *** cells: mEFs in BMS
    *** times: 0 1+++ 2++ 5+ hr
    *** partially reqs: Ikk2 [KO]
    *** source: 12736252-Fig-1c

not Ikke--

  *** Ikba-gene mRNA[Northern] is increased irt Lps (times)
    *** cells: mEFs in BMS
    *** times: 0 1++ 5+ hr
    *** does not req: Ikke [KO]
    *** source: 12736252-Fig-2a
  *** Ikba-gene mRNA[Northern] is increased irt Lps (times)
    *** cells: mEFs in BMS
    *** times: 0 1+++ 2++ 5+ hr
    *** does not req: Ikke [KO]
    *** source: 12736252-Fig-2b
  *** Ikba-gene mRNA[Northern] is increased irt Lps (tnr)
    *** cells: hUVECs in BMS
    *** does not req: Ikke [RNAi]
    *** source: 12736252-Fig-5d

not Irf3--

  *** Ikba-gene mRNA[RTPCR] is increased irt Lps (6 hr)
    *** cells: mPECs in BMLS
    *** does not req: Irf3 [KO]
    *** source: 16143103-Fig-5c

not Irf8--

  *** Ikba-gene mRNA[RTPCR] is increased irt Lps (times)
    *** cells: mBMfDCs in BMS
    *** times: 0 30+ 60++ 180++ min
    *** does not req: Irf8 [KO]
    *** source: 15153500-Fig-2a
  *** Ikba-gene mRNA[RTPCR] is increased irt Lps (tnr)
    *** cells: mBMfDCs<Irf8~null> in BMS
    *** enhanced by: xIrf8 [addition]
    *** unaffected by: xIrf8(K79E) [addition]
    *** unaffected by: xIrf8(R289E) [addition]
    *** source: 15153500-Fig-2a

Myd88--

  *** Ikba-gene mRNA[MicroArray] is increased irt Lps (6 hr)
    *** cells: mPECs in BMLS
    *** partially reqs: Myd88 [KO]
    *** source: 16143103-Fig-3d
  *** Ikba-gene mRNA[Northern] is increased irt Lps (times)
    *** cells: mPECs in BMS
    *** times: 0 1+ 2+ 4+ hr
    *** partially reqs: Myd88 [KO]
    *** source: 15694359-Fig-1
  *** Ikba-gene mRNA[Northern] is increased irt Lps (times)
    *** cells: mPECs in BMS
    *** times: 0 1+ 2+ 4+ hr
    *** partially reqs: Myd88 [KO]
    *** reqs: Myd88 and/or Trif [DKO]
    *** source: 15694359-Fig-6

not Nfkb1--

  *** Ikba-gene mRNA[RTPCR] is increased irt Lps (1 hr)
    *** cells: mBMMs in BMS
    *** does not req: Nfkb1 [KO]
    *** source: 12667451-Fig-1h

not Pias4--

  *** Ikba-gene mRNA[RTPCR] is increased irt Lps (times)
    *** cells: mBMDCs in BMS
    *** times: 0 60++ 180+ 360+ min
    *** unaffected by: Pias4 [KO]
    *** source: 17606919-Fig-5b

Rela--

  *** Ikba-gene mRNA[Northern] is increased irt Lps (times)
    *** cells: mEFs in BMS
    *** times: 0 1++ 2++ 5+ hr
    *** reqs: Rela [KO]
    *** source: 12736252-Fig-1d
  *** Ikba-gene mRNA[RTPCR] is increased irt Lps (6 hr)
    *** cells: mHMCs<Tnf~null><Rel~null> in BMLS
    *** reqs: Rela [KO]
    *** source: 16143103-Fig-S1

Rnf11--

  *** Ikba[Ab] prot-exp[WB] is decreased irt Lps (times)
    *** cells: THP1 in BMS
    *** times: 0++ 15 60+ 120++ 240++ min
    *** comment: reappearance at 60 min reqs Rnf11 [RNAi]
    *** source: 19131965-Fig-3b

not Tab2--

  *** Ikba-gene mRNA[Northern] is increased irt Lps (16 hr)
    *** cells: mEFs in BMS
    *** does not req: Tab2 [KO]
    *** source: 12556483-Fig-3c

not Tbk1--

  *** Ikba-gene mRNA[RTPCR] is increased irt Lps (times)
    *** cells: mBMMs in BMS
    *** times: 0 1+ 4 hr
    *** does not req: Tbk1 and/or TnfR1 [DKO]
    *** source: 15210743-Fig-3c

Trif--

  *** Ikba-gene mRNA[Northern] is increased irt Lps (times)
    *** cells: mPECs in BMS
    *** times: 0 1+ 2+ 4+ hr
    *** comment: reqs Trif [KO] 4 hr only
    *** source: 15694359-Fig-1
  *** Ikba-gene mRNA[Northern] is increased irt Lps (times)
    *** cells: mPECs in BMS
    *** times: 0 1+ 2+ 4+ hr
    *** partially reqs: Trif [KO]
    *** reqs: Myd88 and/or Trif [DKO]
    *** source: 15694359-Fig-1

not TnfR1--

  *** Ikba-gene mRNA[RTPCR] is increased irt Lps (times)
    *** cells: mBMMs in BMS
    *** times: 0 1+ 4 hr
    *** does not req: Tbk1 and/or TnfR1 [DKO]
    *** source: 15210743-Fig-3c

Tnfaip3--

  *** Ikba[Ab] prot-exp[WB] is decreased irt Lps (times)
    *** cells: THP1 in BMS
    *** times: 0++ 15 60+ 120++ 240++ min
    *** comment: reappearance at 60 min reqs Tnfaip3 [RNAi]
    *** source: 19131965-Fig-3b
  *** Ikba[Ab] prot-exp[WB] is decreased irt Lps (times)
    *** cells: mEFs in BMS
    *** times: 0++ 30 60+ min
    *** comment: reappearance of Ikba after 60 min reqs Tnfaip3 [KO]
    *** source: 20185725-Fig-1d

not Traf3--

  *** Ikba-gene mRNA[RTPCR] is increased irt Lps (90 min)
    *** cells: mBMMs in BMS
    *** does not req: Traf3 [KO]
    *** source: 16306937-Fig-S3c
  *** Ikba-gene mRNA[RTPCR] is increased irt Lps (tnr)
    *** cells: mBMMs in BMS
    *** does not req: Traf3 [KO]
    *** source: 16306936-Fig-1a

Traf6--

  *** Ikba-gene mRNA[RTPCR] is increased irt Lps (6 hr)
    *** cells: mBMMs in BMS
    *** does not req: Traf6 [KO]
    *** source: 16306937-Fig-S5c

Chemicals

  *** Ikba-gene mRNA[RTPCR] is increased irt Lps (6 hr)
    *** cells: mPECs in BMLS
    *** unaffected by: Dexamethasone [addition]
    *** source: 16143103-Fig-5b
  *** Ikba-gene mRNA[MicroArray] is increased irt Lps (6 hr)
    *** cells: mPECs in BMLS
    *** unaffected by: Dexamethasone [addition]
    *** source: 16143103-Fig-3d
  *** Ikba-gene mRNA[RTPCR] is increased irt Lps (tnr)
    *** cells: mBMMs in BMS
    *** partially inhibited by: Dynasore [addition]
    *** source: 18297073-Fig-1d

no extras

  *** Ikba-gene mRNA[Northern] is increased irt Lps (2 hr)
    *** cells: mLFs in BMS
    *** source: 15241416-Fig-1a
  *** Ikba-gene mRNA[MicroArray] is increased irt Lps (3 hr)
    *** cells: THP1 in BMS
    *** source: 22833096-Table-S1a
