mod NGFRULES is inc ALLOPS .

var xout : Soup .
vars clo clm clr cli clc nuo num nui nuc : Soup .
vars moo mom moi moc mio mim mii mic : Soup .
vars ero erm eri erc pxo pxm pxi pxc : Soup .
vars gao gam gai gac lyo lym lyi lyc : Soup .
vars eeo eem eei eec leo lem lei lec : Soup .
vars cpo cpm cpi cpc ct ptc sig : Soup .
var ngfrc : Soup .
var trkac : Soup .
*** var AnyLoc : LocName .
*** var anyloc : Soup .

*** ~/evidence/Ngf-Evidence/00NgfEvidence.txt

rl[1482.NgfR.irt.Ngf]:
  {XOut  | xout Ngf           }
  {NgfRC | ngfrc NgfR         }
  =>
  {XOut  | xout Ngf              }
  {NgfRC | ngfrc (NgfR : Ngf) } .
  --------------------------------------------
  *** ~/evidence/Ngf-Evidence/NgfR.irt.Ngf.1482.txt

rl[1481.Trka.irt.Ngf]:
  {XOut  | xout   Ngf                   }
  {TrkaC | trkac Trka                   }
  =>
  {XOut  | xout  Ngf                       }
  {TrkaC | trkac ([Trka - Yphos] : Ngf) } .
  --------------------------------------------
  *** ~/evidence/Ngf-Evidence/Trka.irt.Ngf.1481.txt

*** Akt1--

rl[1484.Akt1.irt.NgfR.Ngf]:
  {NgfRC | ngfrc (NgfR : Ngf)         }
  {CLc   | clc    Akt1                }
  => 
  {NgfRC | ngfrc (NgfR : Ngf)         }
  {CLc   | clc   [Akt1 - act]         } .
  --------------------------------------------
  *** ~/evidence/Ngf-Evidence/Akt1.irt.NgfR.Ngf.1484.txt

rl[1510.Akt1.irt.Trka.Ngf]:
  {TrkaC | trkac ([Trka - Yphos] : Ngf) }
  {CLc   | clc     Akt1                 }
  => 
  {TrkaC | trkac ([Trka - Yphos] : Ngf) }
  {CLc   | clc    [Akt1 - act]          } .
  ------------------------------------------
  *** ~/evidence/Ngf-Evidence/Akt1.irt.Trka.Ngf.1510.txt

*** Aps--

rl[1516.Aps.irt.Ngf]:
  {TrkaC | trkac ([Trka - Yphos] : Ngf)               }
  {CLc   | clc     Aps                                }
  =>
  {TrkaC | trkac ([Trka - Yphos] : Ngf) [Aps - Yphos] }
  {CLc   | clc                                        } .
  ----------------------------------------------------------
  *** ~/evidence/Ngf-Evidence/Aps.irt.Ngf.1516.txt

*** Araf--

rl[1488.Araf.irt.Ngf]:
  {TrkaC | trkac ([Trka - Yphos] : Ngf) }
  {CLc   | clc     Araf                 }
  =>
  {TrkaC | trkac ([Trka - Yphos] : Ngf) }
  {CLc   | clc    [Araf - act]          } .
  --------------------------------------------
  *** ~/evidence/Ngf-Evidence/Araf.irt.Ngf.1488.txt

*** Arms--

rl[1521.Arms.irt.Ngf]:
  {TrkaC | trkac ([Trka - Yphos] : Ngf)                }
  {CLc   | clc      Arms                               }
  =>
  {TrkaC | trkac ([Trka - Yphos] : Ngf) [Arms - Yphos] }
  {CLc   | clc                                         } .
  -----------------------------------------------------------
  *** ~/evidence/Ngf-Evidence/Arms.irt.Ngf.152a.txt

*** Atf2--

rl[1493.Atf2.irt.Ngf]:
  {NgfRC | ngfrc (NgfR : Ngf) Traf6 }
  {CLc   | clc    Atf2              }
  =>
  {NgfRC | ngfrc (NgfR : Ngf) Traf6 }
  {CLc   | clc   [Atf2 - phos]       } .
***  {CLc   | clc   [Atf2 - act]       } .
  --------------------------------------------
  *** ~/evidence/Ngf-Evidence/Atf2.irt.Ngf.1493.txt

*** Braf--

rl[1489.Braf.irt.Ngf]:
  {TrkaC | trkac ([Trka - Yphos] : Ngf) }
  {CLc   | clc      Braf                }
  =>
  {TrkaC | trkac ([Trka - Yphos] : Ngf) }
  {CLc   | clc     [Braf - act]         } .
  --------------------------------------------
  *** ~/evidence/Ngf-Evidence/Braf.irt.Ngf.1489.txt

*** Crks--

rl[003.Crks.irt.Ngf]:
  {TrkaC | trkac ([Trka - Yphos] : Ngf)                     }
  {CLc   | clc     crks:CrkS                                }
  =>
  {TrkaC | trkac ([Trka - Yphos] : Ngf) [crks:CrkS - Yphos] }
  {CLc   | clc                                              } .
  ------------------------------------------------------------
  *** ~/evidence/Ngf-Evidence/Crks.irt.Ngf.003.txt

*** Egr1--
*** Egr1-gene--

rl[1486.Egr1-gene.irt.Ngf]:
  {TrkaC | trkac ([Trka - Yphos] : Ngf) }
  {NUc   | nuc     Egr1-gene            }
  =>
  {TrkaC | trkac ([Trka - Yphos] : Ngf) }
  {NUc   | nuc    [Egr1-gene - on]      } .
  --------------------------------------------
  *** ~/evidence/Ngf-Evidence/Egr1-gene.irt.Ngf.1486.txt

*** Elk1--

rl[1490.Elk1.irt.Ngf]:
  {TrkaC | trkac ([Trka - Yphos] : Ngf)      }
  {CLi    | cli   [Hras - GTP] [Rap1a - GTP] } 
  {NUc    | nuc    Elk1                      }
  =>
  {TrkaC | trkac ([Trka - Yphos] : Ngf)      }
  {CLi    | cli   [Hras - GTP] [Rap1a - GTP] } 
  {NUc    | nuc   [Elk1 - act]               } .
  --------------------------------------------
  *** ~/evidence/Ngf-Evidence/Elk1.irt.Ngf.1490.txt

*** Erks--

rl[1485.Erks.irt.Ngf]:
  {TrkaC | trkac ([Trka - Yphos] : Ngf)     }
  {CLi   | cli    [Hras - GTP] [Rit1 - GTP] } 
  {CLc   | clc     Pkcd Erks                }
  =>
  {TrkaC | trkac ([Trka - Yphos] : Ngf)     }
  {CLi   | cli    [Hras - GTP] [Rit1 - GTP] } 
  {CLc   | clc     Pkcd [Erks - act]        } .
  -------------------------------------------------
  *** ~/evidence/Ngf-Evidence/Erks.irt.Ngf.1485.txt

*** Erk5--

rl[1495.Erk5.irt.Ngf]:
  {TrkaC | trkac ([Trka - Yphos] : Ngf) }
  {CLc   | clc      Erk5                }
  =>
  {TrkaC | trkac ([Trka - Yphos] : Ngf) }
  {CLc   | clc     [Erk5 - act]         } .
  --------------------------------------------
  *** ~/evidence/Ngf-Evidence/Erk5.irt.Ngf.1495.txt

*** Fos--
*** Fos-gene--

rl[1487.Fos-gene.irt.Ngf]:
  {TrkaC | trkac ([Trka - Yphos] : Ngf) }
  {NUc   | nuc     Fos-gene             }
  =>
  {TrkaC | trkac ([Trka - Yphos] : Ngf) }
  {NUc   | nuc    [Fos-gene - on]       } .
  --------------------------------------------
  *** ~/evidence/Ngf-Evidence/Fos-gene.irt.Ngf.1487.txt

*** Foxo1--

rl[1496.Foxo1.irt.Ngf]:
  {XOut | xout   Ngf                  }
  {NUc  | nuc    Foxo1                }
  =>
  {XOut | xout   Ngf                  }
  {NUc  | nuc   [Foxo1 - phos(S 256)] } .
  --------------------------------------------
  *** ~/evidence/Ngf-Evidence/Foxo1.irt.Ngf.1496.txt

*** Foxo3--

rl[1497.Foxo3.irt.Ngf]:
  {TrkaC | trkac ([Trka - Yphos] : Ngf)            }
  {CLc   | clc      Foxo3                          }
  =>
  {TrkaC | trkac ([Trka - Yphos] : Ngf)            }
  {CLc   | clc    [Foxo3 - phos(T 32) phos(S 253)] } .
  -----------------------------------------------------
  *** ~/evidence/Ngf-Evidence/Foxo3.irt.Ngf.1497.txt

*** Frs2--

rl[1498.Frs2.irt.Ngf]:
  {TrkaC | trkac ([Trka - Yphos] : Ngf)                }
  {CLc   | clc     Frs2                                }
  =>
  {TrkaC | trkac ([Trka - Yphos] : Ngf) [Frs2 - Yphos] }
  {CLc   | clc                                         } .
  -----------------------------------------------------------
  *** ~/evidence/Ngf-Evidence/Frs2.irt.Ngf.1498.txt

*** Gab1--

rl[1520.Gab1.irt.Ngf]:
  {TrkaC | trkac ([Trka - Yphos] : Ngf)                }
  {CLc   | clc      Gab1                               }
  =>
  {TrkaC | trkac ([Trka - Yphos] : Ngf) [Gab1 - Yphos] }
  {CLc   | clc                                         } .
  ------------------------------------------------------------
  *** ~/evidence/Ngf-Evidence/Gab1.irt.Ngf.1520.txt

*** Gab2--

rl[1499.Gab2.irt.Ngf]:
  {TrkaC | trkac ([Trka - Yphos] : Ngf)                }
  {CLc   | clc      Gab2                               }
  =>
  {TrkaC | trkac ([Trka - Yphos] : Ngf) [Gab2 - Yphos] }
  {CLc   | clc                                         } .
  ------------------------------------------------------------
  *** ~/evidence/Ngf-Evidence/Gab2.irt.Ngf.1499.txt

*** Grb2--

rl[1500.Grb2.irt.Ngf]:
  {TrkaC | trkac ([Trka - Yphos] : Ngf)      }
  {CLc   | clc      Grb2                      }
  =>
  {TrkaC | trkac ([Trka - Yphos] : Ngf) Grb2 }
  {CLc   | clc                               } .
  -----------------------------------------------------
  *** ~/evidence/Ngf-Evidence/Grb2.irt.Ngf.1500.txt

*** Hras--

rl[1501.Hras.irt.Ngf]:
  {TrkaC | trkac ([Trka - Yphos] : Ngf) }
  {CLi   | cli    [Hras - GDP]          }
  =>
  {TrkaC | trkac ([Trka - Yphos] : Ngf) }
  {CLi   | cli    [Hras - GTP]          } .
  ---------------------------------------------------------
  *** ~/evidence/Ngf-Evidence/Hras.irt.Ngf.1501.txt

*** Ikba--

rl[1502.Ikba.irt.Ngf]:
  {NgfRC | ngfrc (NgfR : Ngf)       }
  {CLc   | clc    Ikba              }
  {Sig   | sig                      }
 =>
  {NgfRC | ngfrc (NgfR : Ngf)       }
  {CLc   | clc                      }
  {Sig    | sig  [Ikba - degraded]  } .
  ---------------------------------------------------------
  *** ~/evidence/Ngf-Evidence/Ikba.irt.Ngf.1502.txt

*** Ikk1--

rl[1503.Ikk1.irt.Ngf]:
  {NgfRC | ngfrc NgfR         }
  {CLc   | clc   Ikk1         }
 =>
  {NgfRC | ngfrc NgfR Ikk1    }
  {CLc   | clc                } .
  ---------------------------------------------------------
  *** ~/evidence/Ngf-Evidence/Ikk1.irt.Ngf.1503.txt

*** Ikk2--

rl[1504.Ikk2.irt.Ngf]:
  {NgfRC | ngfrc (NgfR : Ngf)  Sqstm1      }
  {CLc   | clc   Ikk2                      }
 =>
  {NgfRC | ngfrc (NgfR : Ngf)  Sqstm1 Ikk2 }
  {CLc   | clc                             } .
  ---------------------------------------------------------
  *** ~/evidence/Ngf-Evidence/Ikk2.irt.Ngf.1504.txt

*** Irak1--

rl[1491.Irak1.irt.Ngf]:
  {NgfRC | ngfrc (NgfR : Ngf)               }
  {CLc   | clc    Irak1                     }
  =>
  {NgfRC | ngfrc (NgfR : Ngf) [Irak1 - act] }
  {CLc   | clc                              } .
  --------------------------------------------
  *** ~/evidence/Ngf-Evidence/Irak1.irt.Ngf.1491.txt

*** Jnks--
***(
rl[525.Jnks.irt.Ngf]:
  {NgfRC | ngfrc (NgfR : Ngf) Traf6  }
  {CLc   | clc    Jnks               }
  =>
  {NgfRC | ngfrc (NgfR : Ngf) Traf6  }
  {CLc   | clc   [Jnks - act]        } .
  --------------------------------------
  *** ~/evidence/Ngf-Evidence/Jnks.irt.Ngf.525.txt
)***

rl[525.Jnks.irt.Ngf]:
  {NgfRC | ngfrc  Traf6  }
  {CLc   | clc    Jnks               }
  =>
  {NgfRC | ngfrc  Traf6  }
  {CLc   | clc   [Jnks - act]        } .
  --------------------------------------
  *** ~/evidence/Ngf-Evidence/Jnks.irt.Ngf.525.txt

*** Matk--

rl[1519.Matk.irt.Ngf]:
  {TrkaC | trkac ([Trka - Yphos] : Ngf)      }
  {CLc    | clc      Matk                    }
  =>
  {TrkaC | trkac ([Trka - Yphos] : Ngf) Matk }
  {CLc    | clc      Matk                    } .
  --------------------------------------------
  *** ~/evidence/Ngf-Evidence/Matk.irt.Ngf.1519.txt


*** Mek12s--

rl[1505.Mek12s.irt.Ngf]:
  {TrkaC | trkac ([Trka - Yphos] : Ngf) }
  {CLc   | clc     mek12s:Mek12S        }
  =>
  {TrkaC | trkac ([Trka - Yphos] : Ngf) }
  {CLc   | clc    [mek12s:Mek12S - act] } .
  --------------------------------------------
  *** ~/evidence/Ngf-Evidence/Mek12s.irt.Ngf.1505.txt

*** Myd88--

rl[1506.Myd88.irt.Ngf]:
  {NgfRC | ngfrc (NgfR : Ngf)               }
  {CLc   | clc    Myd88                     }
  =>
  {NgfRC | ngfrc (NgfR : Ngf) Myd88         }
  {CLc   | clc                              } .
  --------------------------------------------
  *** ~/evidence/Ngf-Evidence/Myd88.irt.Ngf.1506.txt

*** P38s--

rl[618.P38s.irt.Ngf]:
  {TrkaC | trkac ([Trka - Yphos] : Ngf)      }
  {CLi   | cli    [Rit1 - GTP] [Hras - GTP]  }
  {CLc   | clc     P38s                      }
  =>
  {TrkaC | trkac ([Trka - Yphos] : Ngf)      }
  {CLi   | cli     [Rit1 - GTP] [Hras - GTP] }
  {CLc   | clc     [P38s - act]              } .
  -----------------------------------------------
  *** ~/evidence/Ngf-Evidence/P38s.irt.Ngf.618.txt

*** Pi3k--

rl[1507.Pi3k.irt.Ngf]:
  {TrkaC | trkac ([Trka - Yphos] : Ngf)                }
  {CLc    | clc      Pi3k                              }
  =>
  {TrkaC | trkac ([Trka - Yphos] : Ngf) [Pi3k - Yphos] }
  {CLc    | clc                                        } .
  ------------------------------------------------------------
  *** ~/evidence/Ngf-Evidence/Pi3k.irt.Ngf.1507.txt

*** Plcg1--

rl[1508.Plcg1.irt.Ngf]:
  {TrkaC | trkac ([Trka - Yphos] : Ngf)                 }
  {CLc   | clc     Plcg1                                }
  =>
  {TrkaC | trkac ([Trka - Yphos] : Ngf) [Plcg1 - Yphos] }
  {CLc   | clc                                          } .
  ------------------------------------------------------------
  *** ~/evidence/Ngf-Evidence/Plcg1.irt.Ngf.1508.txt

*** Pxn--

rl[1509.Pxn.irt.Ngf]:
  {TrkaC | trkac ([Trka - Yphos] : Ngf) }
  {CLc  | clc    Pxn                    }
  =>
  {TrkaC | trkac ([Trka - Yphos] : Ngf) }
  {CLc  | clc   [Pxn - phos(S 126)]     } .
  --------------------------------------------
  *** ~/evidence/Ngf-Evidence/Pxn.irt.Ngf.1509.txt

*** Raf1--

rl[1511.Raf1.irt.Ngf]:
  {TrkaC | trkac ([Trka - Yphos] : Ngf) }
  {CLc   | clc      Raf1                }
  =>
  {TrkaC | trkac ([Trka - Yphos] : Ngf) }
  {CLc   | clc     [Raf1 - act]         } .
  --------------------------------------------
  *** ~/evidence/Ngf-Evidence/Raf1.irt.Ngf.1511.txt

*** Rap1a--

rl[1512.Rap1a.irt.Ngf]:
  {TrkaC | trkac ([Trka - Yphos] : Ngf) }
  {CLi   | cli     [Rap1a - GDP]        }
  =>
  {TrkaC | trkac ([Trka - Yphos] : Ngf) }
  {CLi   | cli     [Rap1a - GTP]        } .
  --------------------------------------------
  *** ~/evidence/Ngf-Evidence/Rap1.irt.Ngf.1512.txt

*** RapGef1--

rl[099.RapGef1.irt.Ngf]:
  {TrkaC | trkac ([Trka - Yphos] : Ngf)                   }
  {CLc   | clc     RapGef1                                }
  =>
  {TrkaC | trkac ([Trka - Yphos] : Ngf) [RapGef1 - Yphos] }
  {CLc   | clc                                            } .
  ------------------------------------------------------------
  *** ~/evidence/Ngf-Evidence/RapGef1.irt.Ngf.099.txt

*** Rela--

rl[1528.Rela.irt.Ngf]:
  {NgfRC | ngfrc (NgfR : Ngf)   }
  {CLc   | clc    Rela          }
  {NUc   | nuc                  }
  =>
  {NgfRC | ngfrc (NgfR : Ngf)   }
  {CLc   | clc                  }
  {NUc   | nuc   [Rela - act]   } .
  ------------------------------------------------------------
  *** ~/evidence/Ngf-Evidence/Rela.irt.Ngf.1528.txt

*** Ripk2--

rl[1513.Ripk2.irt.Ngf]:
  {NgfRC | ngfrc (NgfR : Ngf)               }
  {CLc   | clc    Ripk2                     }
  =>
  {NgfRC | ngfrc (NgfR : Ngf) Ripk2         }
  {CLc   | clc                              } .
  --------------------------------------------
  *** ~/evidence/Ngf-Evidence/Ripk2.irt.Ngf.1513.txt

*** Rit1--

rl[1514.Rit1.irt.Ngf]:
  {TrkaC | trkac ([Trka - Yphos] : Ngf) }
  {CLi   | cli     [Rit1 - GDP]           }
  =>
  {TrkaC | trkac ([Trka - Yphos] : Ngf) }
  {CLi   | cli     [Rit1 - GTP]           } .
  --------------------------------------------
  *** ~/evidence/Ngf-Evidence/Rit1.irt.Ngf.1514.txt

*** Sh2b1--

rl[1517.Sh2b1.irt.Ngf]:
  {TrkaC | trkac ([Trka - Yphos] : Ngf)                 }
  {CLc   | clc     Sh2b1                                }
  =>
  {TrkaC | trkac ([Trka - Yphos] : Ngf) [Sh2b1 - Yphos] }
  {CLc   | clc                                          } .
  ------------------------------------------------------------
  *** ~/evidence/Ngf-Evidence/Sh2b1.irt.Ngf.1517.txt

*** Shc1--

rl[1515.Shc1.irt.Ngf]:
  {TrkaC | trkac ([Trka - Yphos] : Ngf)                }
  {CLc   | clc     Shc1                                }
  =>
  {TrkaC | trkac ([Trka - Yphos] : Ngf) [Shc1 - Yphos] }
  {CLc   | clc                                         } .
  --------------------------------------------------------
  *** ~/evidence/Ngf-Evidence/Shc1.irt.Ngf.1515.txt

*** Sqstm1--

rl[1492.Sqstm1.irt.Ngf]:
  {NgfRC | ngfrc (NgfR : Ngf) [Irak1 - act]         }
  {CLc   | clc    Sqstm1                            }
  =>
  {NgfRC | ngfrc (NgfR : Ngf) [Irak1 - act]  Sqstm1 }
  {CLc   | clc                                      } .
  -----------------------------------------------------
  *** ~/evidence/Ngf-Evidence/Sqstm1.irt.Ngf.1492.txt

*** Traf6--

rl[1494.Traf6.irt.Ngf]:
  {NgfRC | ngfrc (NgfR : Ngf)               }
  {CLc   | clc    Traf6                     }
  =>
  {NgfRC | ngfrc (NgfR : Ngf) Traf6         }
  {CLc   | clc                              } .
  --------------------------------------------
  *** ~/evidence/Ngf-Evidence/Traf6.irt.Ngf.1494.txt

*** Znf274--

rl[108.Znf274.ubiq.irt.Ngf]:
  {NgfRC | ngfrc (NgfR : Ngf) Traf6                    }
  {CLc   | clc    Znf274                               }
  =>
  {NgfRC | ngfrc (NgfR : Ngf) Traf6 [Znf274 - K63ubiq] }
  {CLc   | clc                                         } .
  --------------------------------------------------------
  *** ~/evidence/Ngf-Evidence/Znf274.ubiq.irt.Ngf.108.txt

rl[1527.Znf274.to.nuc.irt.Ngf]:
  {NgfRC | ngfrc (NgfR : Ngf) [Znf274 - K63ubiq] }
  {NUc   | nuc                                   }
  =>
  {NgfRC | ngfrc (NgfR : Ngf)                    }
  {NUc   | nuc   [Znf274 - K63ubiq]              } .
  --------------------------------------------------------
  *** ~/evidence/Ngf-Evidence/Znf274.to.nuc.irt.Ngf.1527.txt





endm











