***
***  components.maude
*** 
*************************************************************************

**** CLT fmod PROTEINOPS is inc DOMAIN .
fmod PROTEINOPS is inc THEOPS .

*************************************************************************

*** Relevant Databases (Db)-------------------------------------------------------------------
*** Db: Entrez Gene,PubMed  URL: http://www.ncbi.nlm.nih.gov/sites/entrez
*** Db: PDB   URL: http://www.rcsb.org/pdb/home/home.do
*** Db: PubChem compund (CID)  URL: http://www.ncbi.nlm.nih.gov/sites/entrez?db=pccompound&cmd=search&term=
*** Db: PubChem substance (SID)  URL:  http://www.ncbi.nlm.nih.gov/sites/entrez?db=pcsubstance&cmd=search&term=
*** Db: IUPAC (lipids)  URL:  http://www.chem.qmul.ac.uk/iupac/lipid/
*** Db: SMILES  URL:  http://www.daylight.com/dayhtml/doc/theory/theory.smiles.html
*** Db: MetaCyc  URL: http://biocyc.org/META/server.html (smiles are taken from MetaCyc, if not available in MetCyc, from PubChem)
*** Db: BioCyc  URL:  http://biocyc.org/server.html
*** Db: ENZYME commission (IUBMB)  URL:  http://www.chem.qmul.ac.uk/iubmb/enzyme/
*** Db: Swiss-Prot  URL:  http://expasy.org/sprot/
*** Db: KEGG compound  URL: http://www.genome.ad.jp/dbget-bin/www_bfind_sub?mode=bfind&max_hit=1000&dbkey=compound&keywords=
*** Db: LIPID MAPS (LM_ID) URL: http://www.lipidmaps.org/
*** Db: TubercuList  URL: http://genolist.pasteur.fr/TubercuList/
*** Db: DrugBank  URL: http://redpoll.pharmacy.ualberta.ca/drugbank/cgi-bin/drugSep.cgi?hits=20&browsn=1&pag=1&acco=11
*** Db: KEGG Drug  URL: http://www.genome.jp/dbget-bin/www_bfind?drug
*** Db: Reactome  URL: http://www.reactome.org/


*** Micro-organism-------------------------------------------------------------------
*** Micro-organism information - supplied by KEGG (http://www.genome.ad.jp/kegg-bin/show_organism)
*** Name:  M.tuberculosis, MYCTU, 83332
*** Full name:  Mycobacterium tuberculosis H37Rv
*** Taxonomy:  83332 (http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=83332)
*** Lineage:  Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales; Corynebacterineae; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex
*** Original DB: Sanger Pasteur (http://genolist.pasteur.fr/TubercuList/)
*** Disease: Tuberculosis
*** Chromosome: Circular
*** Sequence: NC_000962 (http://www.genome.jp/dbget-bin/www_bget?refseq+NC_000962)
*** Length: 4411532
*** Statistics: Number of nucleotides: 4411532; Number of protein genes: 3989; Number of RNA genes: 50
*** Reference PMID: 9634230


*** Chemical-------------------------------------------------------------------

*** a-------------------------------------------------------------------------a

op ADP : -> Chemical [metadata "(\
   (category smallmolecule)\
   (common-name \"ADP\")\
   (IUPAC \"[[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-dihydroxy-oxolan-2-yl]methoxy-hydroxy-phosphoryl]oxyphosphonic acid\")\
   (kegg-id C00008)\
   (Reactome-id REACT_2741.1)\
   (CID 6022)\
   (SID 3310)\
   (smiles \"C(OP(O)(=O)OP(O)(O)=O)C1(OC(C(O)C(O)1)n2(c3(c(nc2)c(N)ncn3)))\")\
   (synonyms \"adenosine pyrophosphate \"\
             \"adenosine 5'-pyrophosphate \"\
             \"adenosine-5'-diphosphate \"\
             \"adenosine-diphosphate \"\
             \"adenosine-5-diphosphate\"))"] .

op AMP : -> Chemical [metadata "(\
   (category smallmolecule)\
   (common-name \"AMP\")\
   (IUPAC \"[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-dihydroxy-oxolan-2-yl]methoxyphosphonic acid\")\
   (kegg-id C00020)\
   (Reactome-id REACT_2677.2)\
   (CID 6083)\
   (SID 3322)\
   (smiles \"C(OP(O)(=O)O)C1(OC(C(O)C(O)1)n2(c3(c(nc2)c(N)ncn3)))\")\
   (synonyms \"adenosine-5'-phosphate \"\
             \"adenosine-phosphate \"\
             \"5'-AMP \"\
             \"adenosine-monophosphate \"\
             \"adenylic acid \"\
             \"adenosine 5'-monophosphate \"\
             \"adenylate \"\
             \"5'-adenylic acid \"\
             \"5'-adenosine monophosphate \"\
             \"adenosine 5'-phosphate\"))"] .

op ATP : -> Chemical [metadata "(\
   (category smallmolecule)\
   (common-name \"ATP\")\
   (IUPAC \"[[[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-dihydroxy-oxolan-2-yl]methoxy-hydroxy-phosphoryl]oxy-hydroxy-phosphoryl]oxyphosphonic acid\")\
   (kegg-id C00002)\
   (Reactome-id REACT_2812.1)\
   (CID 5957)\
   (SID 3304)\
   (smiles \"C(OP(O)(=O)OP(=O)(O)OP(O)(O)=O)C1(OC(C(O)C(O)1)n2(c3(c(nc2)c(N)ncn3)))\")\
   (synonyms \"adenylpyrophosphate\"\
             \"adenosine-triphosphate\"\
             \"adenosine-5'-triphosphate\"))"] .

*** c-------------------------------------------------------------------------c    

op CO2 : -> Chemical [metadata "(\
   (category smallmolecule)\
   (common-name \"CO2\")\
   (IUPAC \"carbon dioxide\")\
   (kegg-id C00011)\
   (Reactome-id REACT_2373.1)\
   (CID 280)\
   (SID 3313)\
   (smiles \"C(=O)=O\")\
   (synonyms \"carbonic anhydride \"\
             \"carbonic acid gas\"))"] .  

op CoA : -> Chemical [metadata "(\
   (category smallmolecule)\
   (common-name \"CoA\")\
   (IUPAC \"2-acetyloxybenzoic acid\")\
   (kegg-id C00010)\
   (Reactome-id REACT_2732.1)\
   (CID 2244)\
   (SID 3312)\
   (smiles \"CC(C)(C(O)C(=O)NCCC(=O)NCCS)COP(=O)(O)OP(=O)(O)OC[CH]1(O[CH]([CH](O)[CH]1OP(O)(O )=O)N2(c3(c(N=C2)c(N)ncn3))) \")\
   (synonyms \"co-A-SH \"\
             \"co-enzyme-A \"\
             \"co-A \"\
             \"HS-CoA\"))"] .
             
op acetyl-CoA : -> Chemical [metadata "(\
   (category smallmolecule)\
   (common-name \"acetyl-CoA\")\
   (IUPAC \"[(2R,3S,4R,5R)-2-[[[[(3R)-4-[[3-(2-acetylsulfanylethylamino)-3-oxopropyl]amino]-3-hydroxy-2,2-dimethyl-4-oxobutoxy]-oxidophosphoryl]oxy-oxidophosphoryl]oxymethyl]-5-(6-aminopurin-9-yl)-4-hydroxyoxolan-3-yl] phosphate\")\
   (kegg-id C00024)\
   (CID 45266541)\
   (SID 2093)\
   (smiles \"CC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-] \")\
   (synonyms \"acetyl coenzyme-A \"\
             \"ac-CoA \"\
             \"acetylcoenzyme-A \"\
             \"ac-S-CoA \"\
             \"acetyl-S-CoA\"))"] .
             
op malonyl-CoA : -> Chemical [metadata "(\
   (category smallmolecule)\
   (common-name \"malonyl-CoA\")\
   (IUPAC \" 3-[2-[3-[[4-[[[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-4-hydroxy-3-phosphonooxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-hydroxyphosphoryl]oxy-2-hydroxy-3,3-dimethylbutanoyl]amino]propanoylamino]ethylsulfanyl]-3-oxopropanoicacid\")\
   (kegg-id C00083)\
   (CID 10663)\
   (SID 3383)\
   (smiles \"C(NC(=O)CCNC(C(O)C(COP(=O)(OP([O-])(=O)OCC3(C(C(C(N2(C=NC1(C(N)=NC=NC=12)))O3)O)OP([O-])(=O)[O-]))[O-])(C)C)=O)CSC(=O)CC(=O)[O-] \")\
   (synonyms \"MALONYL COENZYME A \"\
             \"S-(Hydrogen malonyl)coenzyme A\"\
             \"omega-Carboxyacyl-CoA\"\
             \"Coenzyme A S-(hydrogen propanedioate)\"))"] .
             
op cerotoyl-CoA : -> Chemical [metadata "(\
   (category smallmolecule)\
   (common-name \"cerotoyl-CoA\")\
   (IUPAC \"S-[2-[3-[[(2R)-4-[[[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-4-hydroxy-3-phosphonooxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-hydroxyphosphoryl]oxy-2-hydroxy-3,3-dimethylbutanoyl]amino]propanoylamino]ethyl] hexacosanethioate\")\
   (CID 25246198)\
   (SID 85164749)\
   (smiles \"C3(N=C(C1(=C(N(C=N1)C2(OC(C(OP([O-])(=O)[O-])C(O)2)COP(=O)(OP(=O)(OCC(C)(C)C(O)C(=O)NCCC(=O)NCCSC(=O)CCCCCCCCCCCCCCCCCCCCCCCCC)[O-])[O-]))N=3))N)\")\
   (synonyms \"cerotoyl-coenzyme A \"\
             \"C26:0-coenzyme A\"\
             \"hexacosanoyl-coenzyme A\"\
             \"C26:0-CoA\"\
             \"26:0 CoA \"\
             \"hexacosanoyl-CoA (N-C26:0CoA)\"))"] .
             
op 2-carboxyl-cerotoyl-CoA : -> Chemical [metadata "(\
   (category smallmolecule)\
   (common-name \"2-carboxyl-cerotoyl-CoA\")\
   (IUPAC \"2-[2-[3-[[(2R)-4-[[[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-4-hydroxy-3-phosphonatooxyoxolan-2-yl]methoxy-oxidophosphoryl]oxy-oxidophosphoryl]oxy-2-hydroxy-3,3-dimethylbutanoyl]amino]propanoylamino]ethylsulfanylcarbonyl]hexacosanoate\")\
   (CID 46173201)\
   (SID 57392031)\
   (smiles \"C3(N=C(C1(=C(N(C=N1)C2(OC(C(OP([O-])(=O)[O-])C(O)2)COP(=O)(OP(=O)(OCC(C)(C)C(O)C(=O)NCCC(=O)NCCSC(=O)C(C([O-])=O)CCCCCCCCCCCCCCCCCCCCCCCC)[O-])[O-]))N=3))N)\")\
   (synonyms \"2-carboxyl-cerotoyl-coenzyme A\"))"] .
   
op arachidoyl-CoA : -> Chemical [metadata "(\
   (category smallmolecule)\
   (common-name \"arachidoyl-CoA\")\
   (IUPAC \"S-[2-[3-[[(2R)-4-[[[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-4-hydroxy-3-phosphonooxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-hydroxyphosphoryl]oxy-2-hydroxy-3,3-dimethylbutanoyl]amino]propanoylamino]ethyl]icosanethioate\")\
   (CID 3081439)\
   (SID 3882537)\
   (smiles \"CCCCCCCCCCCCCCCCCCCC(SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(OC(C(C1OP([O-])(=O)[O-])O)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-])=O \")\
   (synonyms \"Coenzyme A S-eicosanoate \"\
              \"Arachidoyl-coenzyme A\"))"] .
             
*** e-------------------------------------------------------------------------e

op activated-Ethionamide : -> Chemical [metadata "(\
   (category smallmolecule)\
   (common-name \"Ethionamide\")\
   (IUPAC \"2-ethylpyridine-4-carbothioamide\")\
   (kegg-id C07665)\
   (CID 2761171)\
   (SID 9867)\
   (smiles \"CCC1=NC=CC(=C1)C(=S)N\")\
   (drugbank-id APRD00961)\
   (kegg drug-id \"D00591\")\
   (comment \"Ethionamide (ETH) = drug \")\
   (synonyms \"Thioamide \"\
             \"Ethioniamide \"\
             \"Ethyonomide \"\
             \"Etioniamid \"\
             \"Etionizina \"\
             \"Etionizine \"\
             \"Fatoliamid \"\
             \"Isotiamida \"\
             \"Trescazide\"))"] .
*** h-------------------------------------------------------------------------h

op H+ : -> Chemical [metadata "(\
   (category smallmolecule)\
   (common-name \"H+\")\
   (IUPAC \"hydrogen(+1)cation\")\
   (kegg-id C00080)\
   (Reactome-id )\
   (CID 1038)\
   (SID 3380)\
   (smiles \"[H+1]\")\
   (synonyms \"hydrogen ion \"\
             \"proton\"))"] .
             
op H2O : -> Chemical [metadata "(\
   (category smallmolecule)\
   (common-name \"H2O\")\
   (IUPAC \"oxidane\")\
   (kegg-id C00001)\
   (Reactome-id REACT_3683.1)\
   (CID 962)\
   (SID 3303)\
   (smiles \"[OH2]\")\
   (synonyms \"hydrogen oxide \"\
             \"water\"))"] .  
             
op hydrazine : -> Chemical [metadata "(\
   (category smallmolecule)\
   (common-name \"hydrazine\")\
   (IUPAC \"hydrazine\")\
   (kegg-id C05361)\
   (Reactome-id )\
   (CID 9321)\
   (SID 7738)\
   (smiles \"NN\")\
   (synonyms ))"] .    
             
*** i-------------------------------------------------------------------------i

op Isoniazid : -> Chemical [metadata "(\
   (category smallmolecule)\
   (common-name \"Isoniazid\")\
   (IUPAC \"pyridine-4-carbohydrazide\")\
   (kegg-id C07054)\
   (CID 3767)\
   (SID 9266)\
   (smiles \"C1=CN=CC=C1C(=O)NN\")\
   (drugbank-id \"APRD01055\")\
   (kegg drug-id \"D00346\")\
   (comment \"Isoniazid (INH)  = Isonicotinic acid hydrazide = drug\")\
   (synonyms \"Nydrazid \"\
             \"Nicotibina \"\
             \"Andrazide \"\
             \"Cotinazin \"\
             \"Dinacrin \"\
             \"Neoteben \"\
             \"Nicizina \"\
             \"Nicozide \"\
             \"Pycazide\"))"] .
             
op Isonicotinic-acyl-anion : -> Chemical [metadata "(\
   (category smallmolecule)\
   (comment \"isonicotinic acyl anion and/ isonicotinic acyl radical = activated form of isoniazid  \"\
            \"KatG, a catalase-peroxidase oxidzes INH to the activated intermediate by increasing the rate of conversion of Mn2+ to Mn3+ ions. [9417034(D)] \"))"] .
            
*** m-------------------------------------------------------------------------m

op Mn2+ : -> Chemical [metadata "(\
   (category smallmolecule)\
   (common-name \"Mn2+\")\
   (IUPAC \"manganese\")\
   (kegg-id C00034)\
   (CID 23930)\
   (SID 3336)\
   (smiles \"[Mn+2]\")\
   (synonyms \"manganese ion \"\
            \"Mn(II) \"\
            \"Mn+2 \"\
            \"Mn++ \"\
            \"manganese (II) ion\"))"] .        
            
op Mn3+ : -> Chemical [metadata "(\
   (category smallmolecule)\
   (common-name \"Mn3+\")\
   (IUPAC \"manganese(+3) cation\")\
   (kegg-id C00034)\
   (CID 105130)\
   (SID 3336)\
   (smiles \"[Mn+3]\")\
   (synonyms \"Manganese(3+) \"\
            \"manganic ion \"\
            \"Manganese(3+)ions \"\
            \"Manganese(3+), ion\"\
            \"manganese(3+) ion\"\
            \"Manganese ion(3+)\"\
            \"manganese(III) cation\"\
            \"Mn(III)\"\
            \"Manganese, ion(Mn3+)\"\
            \"MANGANESE (III) ION\"))"] .
            
*** n-------------------------------------------------------------------------n

op NAD+ : -> Chemical [metadata "(\
   (category smallmolecule)\
   (common-name \"NAD+\")\
   (IUPAC \"[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-dihydroxy-oxolan-2-yl]methoxy-[[(2R,3S,4R,5R)-5-(5-carbamoylpyridin-1-yl)-3,4-dihydroxy-oxolan-2-yl]methoxy-hydroxy-phosphoryl]oxy-phosphinic acid\")\
   (kegg-id C00003)\
   (Reactome-id REACT_5381.1)\
   (CID 5893)\
   (SID 3305)\
   (smiles \"c1([n+1](cc(C(=O)N)cc1)C2(OC(C(O)C2O)COP(=O)(O)OP(=O)(O)OCC3(OC(C(O)C3O)n4(c5(c(nc4)c(N)ncn5)))))\")\
   (synonyms \"beta-nicotinamide adenine dinucleotide \"\
             \"coenzyme I \"\
             \"diphosphopyridine nucleotide\"\
             \"diphosphopyridine nucleotide oxidized\"\
             \"nicotinamide adenine dinucleotide \"\
             \"nicotinamide adenine dinucleotide oxidized \"\
             \"NAD-oxidized \"\
             \"beta-nicotinamide adenine dinucleotide \"\
             \"NAD-ox\"\
             \"DPN+\"\
             \"DPN-ox\"\
             \"DPN\"\
             \"NAD\"))"] .

op NADH : -> Chemical [metadata "(\
   (category smallmolecule)\
   (common-name \"NADH\")\
   (IUPAC \"[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-dihydroxy-oxolan-2-yl]methoxy-[[(2R,3S,4R,5R)-5-(3-carbamoyl-4H-pyridin-1-yl)-3,4-dihydroxy-oxolan-2-yl]methoxy-hydroxy-phosphoryl]oxy-phosphinic acid\")\
   (kegg-id C00004)\
   (Reactome-id REACT_5115.1)\
   (CID 439153)\
   (SID 3306)\
   (smiles \"C([CH]1(O[CH]([CH](O)[CH]1O)N2(C=C(C(=O)N)[CH2]C=C2)))OP(=O)(O)OP(=O)(O)OC[CH]3( O[CH]([CH](O)[CH](O)3)n4(c5(c(nc4)c(N)ncn5)))\")\
   (synonyms \"NADH2 \"\
             \"dihydrodiphosphopyridine nucleotide \"\
             \"diphosphopyridine nucleotide reduced \"\
             \"dihydronicotinamide adenine dinucleotide \"\
             \"nicotinamide adenine dinucleotide reduced \"\
             \"NAD-reduced \"\
             \"NADH+H+\"\
             \"DPNH\"))"] .

op NADP+ : -> Chemical [metadata "(\
   (category smallmolecule)\
   (common-name \"NADP+\")\
   (IUPAC \"[(2R,3R,4R,5R)-2-(6-aminopurin-9-yl)-5-[[[[(2R,3S,4R,5R)-5-(5-carbamoylpyridin-1-yl)-3,4-dihydroxy-oxolan-2-yl]methoxy-hydroxy-phosphoryl]oxy-hydroxy-phosphoryl]oxymethyl]-4-hydroxy-oxolan-3-yl]oxyphosphonic acid\")\
   (kegg-id C00006)\
   (Reactome-id REACT_4609.1)\
   (CID 5886)\
   (SID 3308)\
   (smiles \"C(C1(OC(C(C(O)1)OP(O)(=O)O)n2(c3(c(nc2)c(N)ncn3))))OP(O)(=O)OP(=O)(O)OCC4(OC(C(O)C(O)4)[n+1]5(cc(C(N)=O)ccc5))\")\
   (synonyms \"coenzyme II \"\
             \"triphosphopyridine nucleotide\"\
             \"nicotinamide adenine dinucleotide phosphate\"\
             \"NADP-oxidized\"\
             \"NADP-ox \"\
             \"NADP+ \"\
             \"nicotinamide adenine dinucleotide-P \"\
             \"TPN \"\
             \"TPN+\"\
             \"TPN-ox\"\
             \"NADP(+)\"\
             \"NADP\"))"] .
             
op NADPH : -> Chemical [metadata "(\
   (category smallmolecule)\
   (common-name \"NADPH\")\
   (IUPAC \"[(2R,3R,4R,5R)-2-(6-aminopurin-9-yl)-5-[[[[(2R,3S,4R,5R)-5-(3-carbamoyl-4H-pyridin-1-yl)-3,4-dihydroxy-oxolan-2-yl]methoxy-hydroxy-phosphoryl]oxy-hydroxy-phosphoryl]oxymethyl]-4-hydroxy-oxolan-3-yl]oxyphosphonic acid\")\
   (kegg-id C00005)\
   (Reactome-id REACT_2991.1)\
   (CID 5884)\
   (SID 3307)\
   (smiles \"C(C1(OC(C(C(O)1)OP(O)(=O)O)n2(c3(c(nc2)c(N)ncn3))))OP(O)(=O)OP(=O)(O)OCC4(OC(C(O)C(O)4)N5(C=C(C(N)=O)CC=C5))\")\
   (synonyms \"Nicotinamide adenine dinucleotide phosphate - reduced \"\
             \"NADPH+H+ \"\
             \"NADPH2\"\
             \"dihydrotriphosphopyridine nucleotide\"\
             \"dihydrotriphosphopyridine nucleotide reduced\"\
             \"dihydronicotinamide adenine dinucleotide phosphate \"\
             \"dihydronicotinamide adenine dinucleotide phosphate reduced \"\
             \"NADP-reduced \"\
             \"NADP-red\"\
             \"NADPH+H+\"\
             \"TPNH\"\
             \" dihydronicotinamide adenine dinucleotide-P\"\
             \"NADP(H)\"))"] .
             
*** p-------------------------------------------------------------------------p

op phosphate : -> Chemical [metadata "(\
   (category smallmolecule)\
   (common-name \"phosphate\")\
   (IUPAC \"phosphoric acid\")\
   (kegg-id C00009)\
   (Reactome-id REACT_2728.1)\
   (CID 1004)\
   (SID 3311)\
   (smiles \"P([O-1])([O-1])(=O)[O-1]\")\
   (synonyms \"inorganic phosphate \"\
             \"phosphate-inorganic\"\
             \"Pi \"\
             \"orthophosphate \"\
             \"PO43- \"\
             \"HPO42- - \"\
             \"HPO4-2\"))"] .
             
*** Protein-------------------------------------------------------------------             

*** a-------------------------------------------------------------------------a

op AccA3 : -> Protein .

op AccD3 : -> Protein .
             
op AccD4 : -> Protein [metadata "(\
   (common-name \"AccD4\")\
   (PDB-id )\
   (Swiss-Prot-id O53578)\
   (IUBMB-id  6.4.1.3)\
   (TubercuList-id Rv3799c)\
   (kegg-id mtu:Rv3799c)\
   (BioCyc-id RV3799C)\
   (Entrez-Gene-id 886131)\
   (PMID 12657046 11929527)\
   (synonyms \"PROBABLE PROPIONYL-CoA CARBOXYLASE BETA CHAIN 4 ACCD4\"\
             \"Propionyl-CoA carboxylase, beta subunit\"\
             \"PROPANOYL-COA:CARBON DIOXIDE LIGASE\"\
             \"PCCASE\"\))"] .
             
op AccD5 : -> Protein [metadata "(\
   (common-name \"AccD5\")\
   (PDB-id 2a7s)\
   (Swiss-Prot-id P96885)\
   (IUBMB-id  6.4.1.3)\
   (TubercuList-id Rv3280)\
   (kegg-id mtu:Rv3280)\
   (BioCyc-id RV3280)\
   (Entrez-Gene-id 888725)\
   (PMID 16492739 8987652 10510226)\
   (synonyms \"Probable propionyl-CoA carboxylase beta chain 5\"\
             \"Propanoyl-CoA:carbon dioxide ligase\"\
             \"PCCase\"))"] .
             
op AccD6 : -> Protein .
             
op ACP : -> Protein [metadata "(\
   (common-name \"ACP\")\
   (PDB-id 1klp)\
   (Swiss-Prot-id P0A4W6)\
   (TubercuList-id Rv2244)\
   (kegg-id mtu:Rv2244)\
   (BioCyc-id RV2244)\
   (Entrez-Gene-id 888272)\
   (Pubmed-id 11825906 11420175 11373295)\
   (synonyms \"acyl carrier protein \"\
             \"AcpP \"\
             \"AcpM \"\
             \"holo-[acyl-carrier protein] \"\
             \"ACP-SH \"\
             \"B1094 \"))"] .
 

             
*** c-------------------------------------------------------------------------c             
             
op CmaA2 : -> Protein [metadata "(\
   (common-name \"Cyclopropane-fatty-acyl-phospholipid synthase 2\")\
   (PDB-id 1kpi)\
   (Swiss-Prot-id P0A5P0)\
   (IUBMB-id  2.1.1.79)\
   (TubercuList-id Rv0503c)\
   (kegg-id mtu:Rv0503c)\
   (BioCyc-id RV0503C)\
   (Entrez-Gene-id 887264)\
   (PMID 11756461 7592990 11092877 10882107)\
   (synonyms \"Cyclopropane fatty acid synthase\"\
             \"CFA synthase \"\
             \"cyclopropane mycolic acid synthase 2\"))"] .
             
*** e-------------------------------------------------------------------------e

op EchA10 : -> Protein [metadata "(\
   (common-name \"\")\
   (PDB-id )\
   (Swiss-Prot-id O06542)\
   (IUBMB-id  4.2.1.17)\
   (TubercuList-id Rv1142c)\
   (kegg-id mtu:Rv1142c)\
   (BioCyc-id RV1142C)\
   (Entrez-Gene-id 885458)\
   (PMID )\
   (synonyms \"PROBABLE ENOYL-CoA HYDRATASE ECHA10\"\
             \"ENOYL HYDRASE\"\
             \"UNSATURATED ACYL-CoA HYDRATASE\"\
             \"CROTONASE\"\
             \"Enoyl-CoA hydratase/isomerase family protein\"))"] .

op EchA11 : -> Protein [metadata "(\
   (common-name \"\")\
   (PDB-id )\
   (Swiss-Prot-id O06541)\
   (IUBMB-id  4.2.1.17)\
   (TubercuList-id Rv1141c)\
   (kegg-id mtu:Rv1141c)\
   (BioCyc-id RV1141C)\
   (Entrez-Gene-id 886024)\
   (PMID )\
   (synonyms \"PROBABLE ENOYL-CoA HYDRATASE ECHA11\"\
             \"ENOYL HYDRASE\"\
             \"UNSATURATED ACYL-CoA HYDRATASE\"\
             \"CROTONASE\"\
             \"Enoyl-CoA hydratase/isomerase family protein\"))"] . 

*** f-------------------------------------------------------------------------f 

op FabD : -> Protein [metadata "(\
   (common-name \" \")\
   (PDB-id 2QJ3)\
   (Swiss-Prot-id P63458)\
   (IUBMB-id  2.3.1.39)\
   (TubercuList-id Rv2243)\
   (kegg-id mtu:Rv2243)\
   (BioCyc-id RV2243)\
   (Entrez-Gene-id 888769)\
   (PMID 11373295)\
   (synonyms \"Malonyl CoA-acyl carrier protein transacylase\"\
             \"MCT\"))"] .
             
op FabG1 : -> Protein [metadata "(\
   (common-name \"3-oxoacyl-[acyl-carrier-protein] reductase \")\
   (PDB-id 2ntn)\
   (Swiss-Prot-id P0A5Y4)\
   (IUBMB-id  1.1.1.100)\
   (TubercuList-id Rv1483)\
   (kegg-id mtu:Rv1483)\
   (BioCyc-id RV1483)\
   (Entrez-Gene-id 886551)\
   (PMID 12657046 9802011 11932442 9634230)\
   (synonyms \"3-ketoacyl-acyl carrier protein reductase \"))"] .

op FabH : -> Protein [metadata "(\
   (common-name \"3-oxoacyl-[acyl-carrier-protein] synthase 3 \")\
   (PDB-id 1hzp)\
   (Swiss-Prot-id P0A574)\
   (IUBMB-id  2.3.1.41)\
   (TubercuList-id Rv0533c)\
   (kegg-id mtu:Rv0533c)\
   (BioCyc-id RV0533C)\
   (Entrez-Gene-id 887381)\
   (PMID 11278743 11373295 10840036 12657046)\
   (synonyms \"Beta-ketoacyl-ACP synthase III \"\
             \" Kas III \"\
             \" 3-oxoacyl-[acyl-carrier-protein] synthase III \"\
             \" MtFabH \"))"] .
             
op FadD32 : -> Protein [metadata "(\
   (common-name \" \")\
   (PDB-id )\
   (Swiss-Prot-id O53580)\
   (IUBMB-id  6.2.1.-)\
   (TubercuList-id Rv3801c)\
   (kegg-id )\
   (BioCyc-id )\
   (Entrez-Gene-id 886130)\
   (PMID )\
   (synonyms \"PROBABLE FATTY-ACID-CoA LIGASE FADD32 \"\
             \"FATTY-ACID-CoA SYNTHETASE \"))"] .
                          
op Fas : -> Protein [metadata "(\
   (common-name \" \")\
   (PDB-id )\
   (Swiss-Prot-id P95029)\
   (IUBMB-id 2.3.1.-)\
   (TubercuList-id Rv2524c)\
   (kegg-id mtu:Rv2524c)\
   (BioCyc-id RV2524C)\
   (Entrez-Gene-id 887704)\
   (PMID 9634230)\
   (synonyms \"PROBABLE FATTY ACID SYNTHASE FAS \"\
             \"FATTY ACID SYNTHETASE \"))"] .
             
op FbpA : -> Protein [metadata "(\
   (common-name \"Ag85A \")\
   (PDB-id 1sfr)\
   (Swiss-Prot-id P0A4V2)\
   (IUBMB-id  2.3.1.-)\
   (TubercuList-id Rv3804c)\
   (kegg-id mtu:Rv3804c)\
   (BioCyc-id RV3804C)\
   (Entrez-Gene-id 886132)\
   (PMID 15192106 11940150 8757831 12010501 2506131)\
   (synonyms \"Antigen 85-A [Precursor] \"\
             \"Antigen 85 complex A \"\
             \"85A \"\
             \"Fibronectin-binding protein A \"\
             \"Mycolyl transferase 85A \"))"] .

op FbpB : -> Protein [metadata "(\
   (common-name \"Ag85B\")\
   (PDB-id 1f0n 1f0p)\
   (Swiss-Prot-id P31952)\
   (IUBMB-id  2.3.1.-)\
   (TubercuList-id Rv1886c)\
   (kegg-id mtu:Rv1886c)\
   (BioCyc-id RV1886C)\
   (Entrez-Gene-id 885785)\
   (PMID 11254389 7987013 12010501 7615794 8757831 11940150)\
   (synonyms \"Antigen 85-B [Precursor] \"\
             \"85B \"\
             \"Extracellular alpha-antigen \"\
             \"Antigen 85 complex B \"\
             \"Mycolyl transferase 85B \"\
             \"Fibronectin-binding protein B \"\
             \"30 kDa extracellular protein \"))"] .
             
 *** 1f0p = FbpB+trehalose

op FbpC : -> Protein [metadata "(\
   (common-name \"Ag85C\")\
   (PDB-id 1dqz)\
   (Swiss-Prot-id P0A4V4)\
   (IUBMB-id  2.3.1.-)\
   (TubercuList-id Rv0129c)\
   (kegg-id mtu:Rv0129c)\
   (BioCyc-id RV3803C RV0129C)\
   (Entrez-Gene-id 886885)\
   (PMID 10655617 1715324 12010501 11940150)\
   (synonyms \"Antigen 85-C [Precursor] \"\
             \"85C \"\
             \"Antigen 85 complex C \"\
             \"Antigen 85 complex B \"\
             \"Mycolyl transferase 85C \"\
             \"Fibronectin-binding protein C \"))"] .
             
 *** RV3803C = FbpC1; RV0129C = FbpC2

*** h-------------------------------------------------------------------------i
 
op HadA : -> Protein .

op HadB : -> Protein .

op HadC : -> Protein .

             
*** i-------------------------------------------------------------------------i

op InhA : -> Protein [metadata "(\
   (common-name \"Enoyl-[acyl-carrier-protein] reductase [NADH] \")\
   (PDB-id 1eny)\
   (Swiss-Prot-id P0A5Y6)\
   (IUBMB-id  1.3.1.9)\
   (TubercuList-id Rv1484)\
   (kegg-id mtu:Rv1484)\
   (BioCyc-id RV1484)\
   (Entrez-Gene-id 886523)\
   (PMID 7886450 8896513 10336454)\
   (synonyms \"NADH-dependent enoyl-ACP reductase \"))"] .
   
op IpqX : -> Protein .
             
*** k-------------------------------------------------------------------------k

op KasA : -> Protein [metadata "(\
   (common-name \"3-oxoacyl-[acyl-carrier-protein] synthase 1 \")\
   (PDB-id )\
   (Swiss-Prot-id P63454)\
   (IUBMB-id  2.3.1.41)\
   (TubercuList-id Rv2245)\
   (kegg-id Rv2245)\
   (BioCyc-id RV2245)\
   (Entrez-Gene-id 887269)\
   (PMID 11600501 10536008 12464486 12657046 12081975 9634230)\
   (synonyms \"Beta-ketoacyl-ACP synthase 1 \"\
             \"KAS 1 \"))"] .
            
op KasB : -> Protein [metadata "(\
   (common-name \"3-oxoacyl-[acyl-carrier-protein] synthase 2 \")\
   (PDB-id 2gp6)\
   (Swiss-Prot-id P63456)\
   (IUBMB-id  2.3.1.41)\
   (TubercuList-id Rv2246)\
   (kegg-id Rv2246)\
   (BioCyc-id RV2246)\
   (Entrez-Gene-id 887539)\
   (PMID 11600501 10536008 12464486 12657046 12081975 9634230)\
   (synonyms \"Beta-ketoacyl-ACP synthase 2 \"\
             \"KAS 2 \"))"] .

op KatG : -> Protein [metadata "(\
   (common-name \"Peroxidase/catalase T \")\
   (PDB-id 1sj2)\
   (Swiss-Prot-id Q08129)\
   (IUBMB-id  1.11.1.6)\
   (TubercuList-id Rv1908c)\
   (kegg-id mtu:Rv1908c)\
   (BioCyc-id RV1908C)\
   (Entrez-Gene-id 885638)\
   (Pubmed-id 15231843 12183541 11741602 10463167 7746145 11395468 10517603 11401695 10051449)\
   (synonyms \"Catalase-peroxidase T \"))"] .
   
*** m-------------------------------------------------------------------------m

op MmaA1 : -> Protein [metadata "(\
   (common-name \"MmaA1\")\
   (PDB-id )\
   (Swiss-Prot-id P0A5Q0)\
   (IUBMB-id  2.1.1.- )\
   (TubercuList-id Rv0645c )\
   (kegg-id mtu:Rv0645c)\
   (BioCyc-id RV0645C)\
   (Entrez-Gene-id 888060)\
   (PMID 12657046 11234002 8917504)\
   (synonyms \"Methoxy mycolic acid synthase 1 \"\
             \"Mycolic methyltransferase A 1\"))"] .            
             
op MmaA2 : -> Protein [metadata "(\
   (common-name \"METHOXY MYCOLIC ACID SYNTHASE 2 MMAA2 \")\
   (PDB-id 1tpy)\
   (Swiss-Prot-id Q79FX6)\
   (IUBMB-id  2.1.1.79)\
   (TubercuList-id Rv0644c)\
   (kegg-id mtu:Rv0644c)\
   (BioCyc-id RV0644C)\
   (Entrez-Gene-id 888061)\
   (PMID 12657046 12502719 11234002 8917504)\
   (synonyms \"METHYL MYCOLIC ACID SYNTHASE 2 \"\
             \"HYDROXY MYCOLIC ACID SYNTHASE \"))"] .
             
op MmaA3 : -> Protein [metadata "(\
   (common-name \"MmaA3 \")\
   (PDB-id )\
   (Swiss-Prot-id P72027)\
   (IUBMB-id  2.1.1.-)\
   (TubercuList-id Rv0643c)\
   (kegg-id mtu:Rv0643c)\
   (BioCyc-id RV0643C)\
   (Entrez-Gene-id 888058)\
   (PMID 12368446 8917504 11234002 12657046)\
   (synonyms \"Methoxy mycolic acid synthase 3 \"\
             \"METHOXY MYCOLIC ACID SYNTHASE 3 MMAA3 \"\
             \"METHYL MYCOLIC ACID SYNTHASE 3 \"\
             \"HYDROXY MYCOLIC ACID SYNTHASE \"))"] .

op MmaA4 : -> Protein [metadata "(\
   (common-name \"METHOXY MYCOLIC ACID SYNTHASE 4 MMAA4\")\
   (PDB-id 2fk8)\
   (Swiss-Prot-id Q79FX8)\
   (IUBMB-id  2.1.1.-)\
   (TubercuList-id Rv0642c)\
   (kegg-id mtu:Rv0642c)\
   (BioCyc-id RV0642C)\
   (Entrez-Gene-id 888056)\
   (PMID 16356931 12657046 11234002 8917504)\
   (synonyms \"METHYL MYCOLIC ACID SYNTHASE 4 \"\
             \"HYDROXY MYCOLIC ACID SYNTHASE\"))"] .
*** n-------------------------------------------------------------------------n
   
op Nat : -> Protein [metadata "(\
   (common-name \"Arylamine N-acetyltransferase\")\
   (PDB-id )\
   (Swiss-Prot-id P0A5L8)\
   (IUBMB-id 2.3.1.5)\
   (TubercuList-id Rv3566c)\
   (kegg-id mtu:Rv3566c)\
   (BioCyc-id RV3566C)\
   (Entrez-Gene-id 888005)\
   (PMID 15722451 15117974)\
   (synonyms ))"] .
   
*** o-------------------------------------------------------------------------o

op OtsB1 : -> Protein [metadata "(\
   (common-name \"OtsB1\")\
   (PDB-id )\
   (Swiss-Prot-id Q10850)\
   (IUBMB-id  3.1.3.12)\
   (TubercuList-id Rv2006)\
   (kegg-id mtu:Rv2006)\
   (BioCyc-id )\
   (Entrez-Gene-id 888943)\
   (PMID 15703182 12368430 9634230 4327508 10658666)\
   (synonyms \"Uncharacterized glycosyl hydrolase Rv2006/MT2062 \"\
             \"PROBABLE TREHALOSE-6-PHOSPHATE PHOSPHATASE OTSB1 (TREHALOSE-PHOSPHATASE) (TPP) \"))"] .
   
*** p-------------------------------------------------------------------------p

op PcaA : -> Protein [metadata "(\
   (common-name \"Mycolic acid synthase\")\
   (PDB-id 1l1e)\
   (Swiss-Prot-id Q7D9R5)\
   (IUBMB-id  2.1.1.79)\
   (TubercuList-id Rv0470c)\
   (kegg-id mtu:Rv0470c)\
   (BioCyc-id )\
   (Entrez-Gene-id 886284)\
   (PMID 11756461 10882107 12657046 12368446)\
   (synonyms \"MYCOLIC ACID SYNTHASE PCAA \"\
             \"CYCLOPROPANE SYNTHASE \"\
             \"umaA2\"))"] .
             
op Pks13 : -> Protein [metadata "(\
   (common-name \"Pks13\")\
   (PDB-id )\
   (Swiss-Prot-id O53579)\
   (IUBMB-id  )\
   (TubercuList-id Rv3800c)\
   (kegg-id mtu:Rv3800c)\
   (BioCyc-id RV3800C)\
   (Entrez-Gene-id 886133)\
   (PMID 9634230 12368430)\
   (synonyms \"POLYKETIDE SYNTHASE PKS13  \"\
             \"Polyketide synthase \"))"] .
             
op Pks13-N-PPB : -> Protein [metadata "(\
(comment \" N-terminal phosphopantetheine-binding domain of Pks13 \"))"] .

op Pks13-C-PPB : -> Protein [metadata "(\
(comment \" C-terminal phosphopantetheine-binding domain of Pks13 \"))"] .

op Pks13-AT : -> Protein [metadata "(\
(comment \" Acyl transferase domain of Pks13 \"))"] .

op Pks13-KS : -> Protein [metadata "(\
(comment \" Ketoacyl synthase domain of Pks13 \"))"] .
 
*** r-------------------------------------------------------------------------r

op Rv0098 : -> Protein [metadata "(\
   (common-name \"Rv0098\")\
   (PDB-id )\
   (Swiss-Prot-id P64685)\
   (IUBMB-id  )\
   (TubercuList-id Rv0098)\
   (kegg-id mtu:Rv0098)\
   (BioCyc-id RV0098)\
   (Entrez-Gene-id 886935)\
   (PMID 15653820)\
   (synonyms \"Rv0098 hypothetical protein \"\
             \"beta-Hydroxyacyl-ACP dehydrase \"))"] .
             
op Rv0161 : -> Protein .
   
op Rv1273c : -> Protein [metadata "(\
   (common-name \"Rv1273c\")\
   (PDB-id )\
   (Swiss-Prot-id P0A4W4)\
   (IUBMB-id  )\
   (TubercuList-id Rv1273c)\
   (kegg-id mtu:Rv1273c)\
   (BioCyc-id RV1273C)\
   (Entrez-Gene-id 887025)\
   (PMID 15653820)\
   (synonyms \"PROBABLE DRUGS-TRANSPORT TRANSMEMBRANE ATP-BINDING PROTEIN ABC TRANSPORTER \"))"] . 

op Rv1288 : -> Protein [metadata "(\
   (common-name \"Rv1288\")\
   (PDB-id )\
   (Swiss-Prot-id Q10614)\
   (IUBMB-id  )\
   (TubercuList-id Rv1288)\
   (kegg-id mtu:Rv1288)\
   (BioCyc-id RV1288)\
   (Entrez-Gene-id 886974)\
   (PMID 15653820)\
   (synonyms ))"] . 
   
op Rv2509 : -> Protein .

op Rv3400 : -> Protein .

op Rv3802c : -> Protein [metadata "(\
   (common-name \"Rv3802c\")\
   (PDB-id )\
   (Swiss-Prot-id O53581)\
   (IUBMB-id  )\
   (TubercuList-id Rv3802c)\
   (kegg-id mtu:Rv3802c)\
   (BioCyc-id RV3802C)\
   (Entrez-Gene-id 886135)\
   (PMID 15653820)\
   (synonyms \"PROBABLE CONSERVED MEMBRANE PROTEIN \"))"] . 
   
op Isonicotinic-acyl-NADH : -> Composite [metadata "((ssloc  )\
   (subunits  Isonicotinic-acyl anion NADH \")\
   (comment \"isonicotinic-acyl-NADH = isonicotinic-acyl group from isoniazid attached through its carbonyl C to the C4 of nicotinamide group \"\
            \"by addition of either a isonicotinicacyl anion to NAD+ or an isonicotinic acyl radical to an NAD. radical \"\
            \"activated INH is covalently linked to NADH within the active site of InhA \"\
            \"InhA has a preference for binding NADH first than long-chain acyl-ACP substrate (eg., trans-but-2-enoyl-AcpM) available for attack by activated INH [9417034(D)] \"))"] .
  
op activated-Ethionamide-NADH : -> Composite [metadata "((ssloc  )\
   (subunits activated-Ethionamide NADH \")\
   (comment \"activated-Ethionamide = activated form of ETH and the mechanism of activation is unknown \"\
            \"KatG is not the activator of ethionamide but it also requires activation \"\
            \"activated ethionamide may inhibit InhA by becoming covalently attached to position 4 of the nicotinamide ring of NADH. [9417034(D)] \"))"] .


*** lipid -------------------------------------------------------------------

op alpha-meroacyl-AMP : -> Chemical [metadata "(\
   (category Lipid))"] .
   
op 6-O-cis-keto-mycolyl-beta-D-mannopyranosyl-1-phosphoheptaprenol : -> Chemical [metadata "(\
   (category Lipid))"] .
   
op 6-O-cis-methoxy-mycolyl-beta-D-mannopyranosyl-1-phosphoheptaprenol : -> Chemical [metadata "(\
   (category Lipid))"] .
   
op 6-O-cis-methoxy-mycolyl-trehalose-6-phosphate : -> Chemical [metadata "(\
   (category Lipid))"] .
   
op 6-O-cis-keto-mycolyl-trehalose-6-phosphate : -> Chemical [metadata "(\
   (category Lipid))"] .

op 6-O-mycolyl-beta-D-mannopyranosyl-1-phosphoheptaprenol : -> Chemical [metadata "(\
   (category Lipid))"] .
   
op 6-O-mycolyl-trehalose-6-phosphate : -> Chemical [metadata "(\
   (category Lipid))"] .
   
op 6-O-trans-keto-mycolyl-beta-D-mannopyranosyl-1-phosphoheptaprenol : -> Chemical [metadata "(\
   (category Lipid))"] .
   
op 6-O-trans-keto-mycolyl-trehalose-6-phosphate : -> Chemical [metadata "(\
   (category Lipid))"] .
   
op 6-O-trans-methoxy-mycolyl-beta-D-mannopyranosyl-1-phosphoheptaprenol : -> Chemical [metadata "(\
   (category Lipid))"] .
   
op 6-O-trans-methoxy-mycolyl-trehalose-6-phosphate : -> Chemical [metadata "(\
   (category Lipid))"] .     
   
op acetyl-CoA : -> Chemical [metadata "(\
   (category Lipid)\
   (common-name \"acetyl-CoA\")\
   (IUPAC \"[2-[[[[3-[2-(2-acetylsulfanylethylcarbamoyl)ethylcarbamoyl]-3-hydroxy-2,2-dimethyl-propoxy]-hydroxy-phosphoryl]oxy-hydroxy-phosphoryl]oxymethyl]-5-(6-aminopurin-9-yl)-4-hydroxy-oxolan-3-yl]oxyphosphonic acid\")\
   (kegg-id C00024)\
   (Reactome-id REACT_2630.1)\
   (CID 6302)\
   (SID 3326)\
   (LM_ID LMFA07050029)\
   (smiles \"[CH]3(n1(c2(c(nc1)c(N)ncn2)))(O[CH]([CH]([CH](O)3)OP(=O)(O)O)COP(O)(=O)OP(O)(=O)OCC(C)(C)C(O)C(=O)NCCC(=O)NCCSC(C)=O)\")\
   (synonyms \"acetyl coenzyme-A \"\
             \"ac-CoA \"\
             \"acetylcoenzyme-A \"\
             \"acetyl-S-CoA \"\
             \"ac-S-CoA\"))"] .
             
 op alpha-meroacyl-AMP  : -> Chemical [metadata "(\
    (category Lipid))"] .
    
 op arabinogalactan : -> Chemical [metadata "(\
   (category Lipid)\
   (common-name \"arabinogalactan\")\
   (kegg-id )\
   (LM_ID )\
   (SID 406297)\
   (synonyms ))"] . 
   
op arabinogalactan-mycolate : -> Chemical [metadata "(\
   (category Lipid))"] .
   
op arabinogalactan-cis-methoxy-mycolate : -> Chemical [metadata "(\
   (category Lipid))"] .
   
op arabinogalactan-trans-methoxy-mycolate : -> Chemical [metadata "(\
   (category Lipid))"] .
   
op arabinogalactan-cis-keto-mycolate : -> Chemical [metadata "(\
   (category Lipid))"] .

op arabinogalactan-trans-keto-mycolate : -> Chemical [metadata "(\
   (category Lipid))"] .
      
op cis-methoxy-meroacyl-AMP  : -> Chemical [metadata "(\
    (category Lipid))"] .
    
op cis-keto-meroacyl-AMP  : -> Chemical [metadata "(\
    (category Lipid))"] .
    
op D-mannopyranosyl-1-phosphoheptaprenol : -> Chemical [metadata "(\
   (category Lipid)\
   (synonyms \"myc-Pl \"))"] .
    
op D-mannosyl-phosphoryl-heptaprenol : -> Chemical [metadata "(\
   (category Lipid)\
   (synonyms \"man-P-heptaprenol \"))"] .
    
op trans-methoxy-meroacyl-AMP  : -> Chemical [metadata "(\
    (category Lipid))"] .
    
op trans-keto-meroacyl-AMP  : -> Chemical [metadata "(\
    (category Lipid))"] .
            
op trehalose  : -> Chemical [metadata "(\
   (category Lipid)\
   (common-name \"trehalose\")\
   (IUPAC \"2-(hydroxymethyl)-6-[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-oxane-3,4,5-triol\")\
   (kegg-id )\
   (LM_ID )\
   (SID 3231)\
   (CID 1143)\
   (smiles \"C(C1C(C(C(C(O1)OC2C(C(C(C(O2)CO)O)O)O)O)O)O)O\")\
   (synonyms \"alpha,alpha-trehalose \"\
             \"alpha-D-glucopyranosyl-alpha-D-glucopyranoside\"))"] .      
      
op trehalose-6-phosphate : -> Chemical [metadata "(\
   (category Lipid)\
   (common-name \"trehalose 6-phosphate\")\
   (IUPAC \"[3,4,5-trihydroxy-6-[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-oxan-2-yl]methoxyphosphonic acid\")\
   (kegg-id )\
   (LM_ID )\
   (SID 3232)\
   (CID 1144)\
   (smiles \"C(C1C(C(C(C(O1)OC2C(C(C(C(O2)COP(=O)(O)O)O)O)O)O)O)O)O\")\
   (synonyms \"TREHALOSE-6P\"\
             \"alpha,alpha-trehalose 6-phosphate \"))"] .
   
op trehalose-mono-mycolate : -> Chemical [metadata "(\
   (category Lipid)\
   (common-name \"trehalose-mono-mycolate\")\
   (IUPAC \"[(2R,3S,4S,5R,6R)-3,4,5-trihydroxy-6-[(2S,3S,4R,5R,6S)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-oxan-2-yl]methyl (E)-3-hydroxy-2-tetradecyl-octadec-11-enoate\")\
   (kegg-id C04218)\
   (LM_ID LMFA01160001)\
   (smiles \"CCCCCCCCCCCCCCC(C(CCCCCCCC=CCCCCCC)O)C(=O)OCC1C(C(C(C(O1)OC2C(C(C(C(O2)CO)O)O)O)O)O)O\")\
   (SID 24701175 6891)\
   (CID 5280660)\
   (synonyms \"TMM\"))"] .

op trehalose-cis-methoxy-mono-mycolate : -> Chemical [metadata "(\
    (category Lipid))"] .

op trehalose-cis-keto-mono-mycolate : -> Chemical [metadata "(\
    (category Lipid))"] .
    
op trehalose-cis-keto-di-mycolate : -> Chemical [metadata "(\
    (category Lipid))"] .
        
op trehalose-cis-methoxy-di-mycolate : -> Chemical [metadata "(\
    (category Lipid))"] .

op trehalose-di-mycolate : -> Chemical [metadata "(\
   (category Lipid)\
   (common-name \"trehalose-di-mycolate\")\
   (IUPAC \"[3,4,5-trihydroxy-6-[3,4,5-trihydroxy-6-[2-[1-hydroxy-12-(2-octadecylcyclopropyl)dodecyl]hexacosanoyloxymethyl]oxan-2-yl]oxy-oxan-2-yl]methyl 3-hydroxy-2-[10-(2-octadecylcyclopropyl)decyl]octacosanoate\")\
   (smiles \"CCCCCCCCCCCCCCCCCCCCCCCCCC(C(CCCCCCCCCCC1CC1CCCCCCCCCCCCCCCCCC)C(=O)OCC2C(C(C(C(O2)OC3C(C(C(C(O3)COC(=O)C(CCCCCCCCCCCCCCCCCCCCCCCC)C(CCCCCCCCCCCC4CC4CCCCCCCCCCCCCCCCCC)O)O)O)O)O)O)O)O\")\
   (SID 596527 3747306)\
   (CID 451713)\
   (synonyms \"Mycobacterial trehalose dimycolate \"\
             \"TDM \"\
             \"Cord factor\"))"] . 
    
op trehalose-trans-methoxy-mono-mycolate : -> Chemical [metadata "(\
    (category Lipid))"] .

op trehalose-trans-keto-mono-mycolate : -> Chemical [metadata "(\
    (category Lipid))"] .

op trehalose-trans-keto-di-mycolate : -> Chemical [metadata "(\
    (category Lipid))"] .
    
op trehalose-trans-methoxy-di-mycolate : -> Chemical [metadata "(\
    (category Lipid))"] .
    


          
endfm
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